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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 16:07:01, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Manihot esculenta clone POYE308-1 glucan water dikinase (gwd) gene, partial cds.
HM046983.1:108-126
AGATAATAAATGCCGATTATGCATTTGTTA108TCCACACGACCAATCCATCTTCTGGGGATTCATCAGAGATATATGCTGA
Manihot esculenta clone POYE308-2 glucan water dikinase (gwd) gene, partial cds.
HM046984.1:108-126
AGATAATAAATGCCGATTATGCATTTGTTA108TCCACACGACCAATCCATCTTCTGGGGATTCATCAGAGATATATGCTGA
Manihot esculenta clone POYE308-3 glucan water dikinase (gwd) gene, partial cds.
HM046985.1:108-126
AGATAATAAATGCCGATTATGCATTTGTTA108TCCACACGACCAATCCATCTTCTGGGGATTCATCAGAGATATATGCTGA
Manihot esculenta glucan water dikinase 1 (GWD1) mRNA, complete cds.
JN618458.1:4067-4085
AGATAATAAATGCCGATTATGCATTTGTTA4067TCCACACGACCAATCCATCTTCTGGGGATTCATCAGAGATATATGCTGA
Malus domestica genome assembly, chromosome: 12.
OU696688.1:24940251-24940269
CCTAGAACCAAGATCTAGATCCGAGACTGT24940251TCCACACGACCAATCCATCAAGAACCATATCCACAGCCACACCTACAAA
Quercus robur genome assembly, chromosome: 8.
OW028771.1:59235870-59235888
CCGTCGTACTTCTTCGCCGATGCAATAATT59235870TCCACACGACCAATCCATCTGTAGTCGTCACGTAAGAAGATGAGAGCCT
Aplidium turbinatum genome assembly, chromosome: 13.
OU964930.1:2491205-2491223
ATGTAGTAGAGCGTTGTCTCATACGTACTT2491205TCCACACGACCAATCCATCCCGAGTAGAAGTGATTGCGAAAGATAACAG
Diarsia rubi genome assembly, chromosome: 6.
OW026417.1:15526562-15526580
CAACCATTGTTAGTTGCCTCTCACTCACCC15526562TCCACACGACCAATCCATCTAATAATAATAAAAAAATCTTTTTATTTCA
Agriotes lineatus genome assembly, chromosome: 4.
OW679197.1:128312364-128312382
ATCGGATGACCGTGCAGGCCACTATACAGG128312364TCCACACGACCAATCCATCTTTCAGGATATACTATCTTTAAAAATTCGG
Malus hybrid cultivar cultivar Flame chromosome 12.
CP141921.1:7149035-7149053
TTTGTAGGTGTGGCTGTGGATATGGTTCTT7149035GATGGATTGGTCGTGTGGAACAGTCTCGGATCTAGATCTTGGTTCTAGG
Macrobrachium nipponense isolate FS-2020 chromosome 44.
CP062010.1:15990367-15990385
GAACGAACAGATCGGATCATCGAGTGCTGT15990367GATGGATTGGTCGTGTGGAAAGAATGGTCGACTGTAAGCGTGTGAAAAG
Macrobrachium nipponense isolate FS-2020 chromosome 8.
CP062015.1:31021748-31021766
GTTGCAGTTGGAAGGACAAATCGGTGTTGA31021748GATGGATTGGTCGTGTGGAAAGAGTGGTTGGTCAGATATGTTAGGAAAG
Malachius bipustulatus genome assembly, chromosome: 7.
OU342635.1:3433728-3433746
TAAAGATATACAATTTCTGTGAAGTTTGTG3433728GATGGATTGGTCGTGTGGATAACTTCACTCACAATTCTGCTTGCGTAGT
Aplidium turbinatum genome assembly, chromosome: 4.
OU964921.1:36628022-36628040
ATCTTTCACAATTAGGCTACTTCTACTCGG36628022GATGGATTGGTCGTGTGGAGAGTACGTATGAGACAACGCTCTAGTACAT
Tridacna crocea genome assembly, chromosome: 9.
OX031064.1:54230048-54230066
GCCATATGTTTGTTCTGATTTAACTTTATT54230048GATGGATTGGTCGTGTGGAAAGCCCATTTTAGTCTGAAGAAGGCTTGGG
Athrips mouffetella genome assembly, chromosome: 5.
OX383961.1:15828179-15828197
ACTTAATTAAAATTGAAAAAGGCATGCTGA15828179GATGGATTGGTCGTGTGGAGAGTTTTGAATGCTGAGTGAGAGTGTTTAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCCACACGACCAATCCATC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCACACGACCAATCCATC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.190 | 0.182 | search_plus_done; http://172.18.8.135:50400/match?q=TCCACACGACCAATCCATC&k=0&no_gap=0&offset=0&limit=50
0.316 | 0.125 | search_minus_done; http://172.18.8.135:50400/match?q=GATGGATTGGTCGTGTGGA&k=0&no_gap=0&offset=0&limit=41
0.321 | 0.005 | cgi_end;

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